Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 AC138951.2-201ENST00000623455 1161 ntBASIC14.35□□□□□ -0.11
SLC6A12P48065 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC6A12P48065 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 AC215219.1-201ENST00000400706 1817 ntBASIC14.35□□□□□ -0.11
SLC6A12P48065 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.35□□□□□ -0.11
SLC6A12P48065 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.35□□□□□ -0.11
SLC6A12P48065 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC6A12P48065 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC6A12P48065 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 RN7SL832P-201ENST00000607781 1756 ntBASIC14.34□□□□□ -0.11
SLC6A12P48065 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC6A12P48065 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC6A12P48065 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC6A12P48065 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 CR383656.12-201ENST00000549567 513 ntBASIC14.34□□□□□ -0.11
SLC6A12P48065 AC005225.4-201ENST00000557330 545 ntBASIC14.34□□□□□ -0.11
SLC6A12P48065 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC6A12P48065 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC6A12P48065 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC6A12P48065 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SLC6A12P48065 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SLC6A12P48065 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.34□□□□□ -0.11
SLC6A12P48065 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 AC006504.5-208ENST00000588784 2401 ntBASIC14.34□□□□□ -0.11
SLC6A12P48065 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.34□□□□□ -0.11
SLC6A12P48065 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SLC6A12P48065 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC6A12P48065 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SLC6A12P48065 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC6A12P48065 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC6A12P48065 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.33□□□□□ -0.11
SLC6A12P48065 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC6A12P48065 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.33□□□□□ -0.11
SLC6A12P48065 AC136759.1-202ENST00000530858 2194 ntBASIC14.33□□□□□ -0.11
SLC6A12P48065 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC6A12P48065 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SLC6A12P48065 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC6A12P48065 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms