Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.73□□□□□ -0.21
RFC3P40938 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFC3P40938 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.73□□□□□ -0.21
RFC3P40938 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 PCDHA3-202ENST00000532566 4594 ntBASIC13.72□□□□□ -0.21
RFC3P40938 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 AL359183.1-201ENST00000623796 2132 ntBASIC13.72□□□□□ -0.21
RFC3P40938 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.72□□□□□ -0.21
RFC3P40938 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
RFC3P40938 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 AP001258.2-201ENST00000529891 490 ntBASIC13.72□□□□□ -0.21
RFC3P40938 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 AC106820.3-201ENST00000561653 397 ntBASIC13.72□□□□□ -0.21
RFC3P40938 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.72□□□□□ -0.21
RFC3P40938 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.72□□□□□ -0.21
RFC3P40938 AC138466.3-201ENST00000619983 221 ntBASIC13.72□□□□□ -0.21
RFC3P40938 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.72□□□□□ -0.21
RFC3P40938 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
RFC3P40938 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 AP000845.1-201ENST00000581677 2131 ntBASIC13.72□□□□□ -0.21
RFC3P40938 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.72□□□□□ -0.21
RFC3P40938 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RFC3P40938 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.71□□□□□ -0.21
RFC3P40938 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 FKBP4P6-201ENST00000457486 1332 ntBASIC13.71□□□□□ -0.21
RFC3P40938 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.71□□□□□ -0.21
RFC3P40938 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.71□□□□□ -0.21
RFC3P40938 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.71□□□□□ -0.21
RFC3P40938 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.71□□□□□ -0.21
RFC3P40938 HIST2H2BB-201ENST00000449108 381 ntBASIC13.71□□□□□ -0.21
RFC3P40938 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.71□□□□□ -0.21
RFC3P40938 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.71□□□□□ -0.21
RFC3P40938 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.71□□□□□ -0.21
RFC3P40938 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms