Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNGA1P29973 CICP11-201ENST00000434745 2827 ntBASIC16.97■□□□□ 0.31
CNGA1P29973 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CNGA1P29973 E2F3P2-201ENST00000447755 1422 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 AP000593.2-201ENST00000542775 1433 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.96■□□□□ 0.31
CNGA1P29973 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.96■□□□□ 0.31
CNGA1P29973 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.96■□□□□ 0.31
CNGA1P29973 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.96■□□□□ 0.31
CNGA1P29973 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.96■□□□□ 0.31
CNGA1P29973 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CNGA1P29973 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNGA1P29973 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.96■□□□□ 0.31
CNGA1P29973 PDIA3P2-201ENST00000428073 158 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 NOC2LP1-201ENST00000450578 752 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 AL160314.3-201ENST00000556041 767 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 MIR4783-201ENST00000580343 82 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.96■□□□□ 0.31
CNGA1P29973 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.96■□□□□ 0.31
CNGA1P29973 AC073352.2-201ENST00000609385 439 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CNGA1P29973 COX6A1P2-201ENST00000620597 330 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.96■□□□□ 0.31
CNGA1P29973 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.96■□□□□ 0.31
CNGA1P29973 AC007326.2-201ENST00000624224 7579 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 AL157414.3-201ENST00000624276 1954 ntBASIC16.96■□□□□ 0.31
CNGA1P29973 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.96■□□□□ 0.31
CNGA1P29973 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNGA1P29973 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.96■□□□□ 0.31
CNGA1P29973 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNGA1P29973 SHC1P1-201ENST00000425230 1745 ntBASIC16.96■□□□□ 0.3
CNGA1P29973 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNGA1P29973 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.95■□□□□ 0.3
CNGA1P29973 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
CNGA1P29973 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
CNGA1P29973 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNGA1P29973 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.95■□□□□ 0.3
CNGA1P29973 RN7SKP175-201ENST00000408472 289 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.95■□□□□ 0.3
CNGA1P29973 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.95■□□□□ 0.3
CNGA1P29973 RN7SL818P-201ENST00000485099 259 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 RCC2P8-201ENST00000502779 1035 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 AC019193.1-201ENST00000506678 823 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CNGA1P29973 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.95■□□□□ 0.3
CNGA1P29973 AC008805.1-201ENST00000590892 364 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.95■□□□□ 0.3
CNGA1P29973 AC009955.4-201ENST00000597192 544 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 RN7SL725P-201ENST00000606439 259 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 RN7SL736P-201ENST00000613111 269 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.95■□□□□ 0.3
CNGA1P29973 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNGA1P29973 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.95■□□□□ 0.3
CNGA1P29973 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNGA1P29973 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNGA1P29973 INE2-201ENST00000630399 1874 ntBASIC16.95■□□□□ 0.3
CNGA1P29973 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNGA1P29973 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA1P29973 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA1P29973 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA1P29973 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
CNGA1P29973 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.94■□□□□ 0.3
CNGA1P29973 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA1P29973 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNGA1P29973 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CNGA1P29973 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms