Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC093813.1-201ENST00000605066 256 ntBASIC14.19□□□□□ -0.14
PTPN6P29350 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 AC090505.1-201ENST00000430515 1834 ntBASIC14.19□□□□□ -0.14
PTPN6P29350 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.19□□□□□ -0.14
PTPN6P29350 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PTPN6P29350 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PTPN6P29350 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTPN6P29350 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PTPN6P29350 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTPN6P29350 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.18□□□□□ -0.14
PTPN6P29350 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.18□□□□□ -0.14
PTPN6P29350 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 RPL13AP25-201ENST00000484130 612 ntBASIC14.18□□□□□ -0.14
PTPN6P29350 AC011495.1-201ENST00000498085 584 ntBASIC14.18□□□□□ -0.14
PTPN6P29350 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
PTPN6P29350 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
PTPN6P29350 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PTPN6P29350 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.18□□□□□ -0.14
PTPN6P29350 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PTPN6P29350 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 MST1P2-201ENST00000457982 2291 ntBASIC14.18□□□□□ -0.14
PTPN6P29350 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.18□□□□□ -0.14
PTPN6P29350 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.18□□□□□ -0.14
PTPN6P29350 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PTPN6P29350 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.17□□□□□ -0.14
PTPN6P29350 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.17□□□□□ -0.14
PTPN6P29350 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.17□□□□□ -0.14
PTPN6P29350 NUS1P3-201ENST00000423502 862 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
PTPN6P29350 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms