Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 AGAP7P-201ENST00000582299 2062 ntBASIC13.54□□□□□ -0.24
GDF1P27539 AGAP14-201ENST00000624701 2060 ntBASIC13.54□□□□□ -0.24
GDF1P27539 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GDF1P27539 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.53□□□□□ -0.24
GDF1P27539 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 MIR663B-201ENST00000408361 115 ntBASIC13.53□□□□□ -0.24
GDF1P27539 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.53□□□□□ -0.24
GDF1P27539 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 AC006033.1-201ENST00000440505 426 ntBASIC13.53□□□□□ -0.24
GDF1P27539 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.53□□□□□ -0.24
GDF1P27539 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 AL008638.5-201ENST00000623814 1298 ntBASIC13.53□□□□□ -0.24
GDF1P27539 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.53□□□□□ -0.24
GDF1P27539 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 AC020907.1-201ENST00000616460 1350 ntBASIC13.53□□□□□ -0.24
GDF1P27539 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
GDF1P27539 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDF1P27539 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.53□□□□□ -0.24
GDF1P27539 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GDF1P27539 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
GDF1P27539 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
GDF1P27539 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.52□□□□□ -0.24
GDF1P27539 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
GDF1P27539 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
GDF1P27539 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.52□□□□□ -0.24
GDF1P27539 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GDF1P27539 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.52□□□□□ -0.24
GDF1P27539 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.52□□□□□ -0.25
GDF1P27539 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms