Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
COL8A2P25067 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.62□□□□□ -0.39
COL8A2P25067 TCAF2P1-201ENST00000291129 2421 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.62□□□□□ -0.39
COL8A2P25067 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AC018735.1-201ENST00000437208 1502 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 AC011840.2-201ENST00000563063 1520 ntBASIC12.62□□□□□ -0.39
COL8A2P25067 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COL8A2P25067 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
COL8A2P25067 AC009093.2-202ENST00000620513 2079 ntBASIC12.61□□□□□ -0.39
COL8A2P25067 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
COL8A2P25067 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.61□□□□□ -0.39
COL8A2P25067 RN7SKP175-201ENST00000408472 289 ntBASIC12.61□□□□□ -0.39
COL8A2P25067 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.61□□□□□ -0.39
COL8A2P25067 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
COL8A2P25067 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 AC023090.2-201ENST00000625182 2110 ntBASIC12.61□□□□□ -0.39
COL8A2P25067 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.61□□□□□ -0.39
COL8A2P25067 CICP4-201ENST00000447359 2812 ntBASIC12.61□□□□□ -0.39
COL8A2P25067 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
COL8A2P25067 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COL8A2P25067 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 LINC00528-201ENST00000600723 2160 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.6□□□□□ -0.39
COL8A2P25067 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.6□□□□□ -0.39
COL8A2P25067 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
COL8A2P25067 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 RN7SKP230-201ENST00000365642 335 ntBASIC12.6□□□□□ -0.39
COL8A2P25067 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
COL8A2P25067 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COL8A2P25067 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms