Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
NR4A1P22736 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NR4A1P22736 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.99□□□□□ -0.17
NR4A1P22736 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 MIR943-201ENST00000401286 94 ntBASIC13.99□□□□□ -0.17
NR4A1P22736 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.99□□□□□ -0.17
NR4A1P22736 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.99□□□□□ -0.17
NR4A1P22736 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 AC105021.1-202ENST00000570572 669 ntBASIC13.99□□□□□ -0.17
NR4A1P22736 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.99□□□□□ -0.17
NR4A1P22736 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NR4A1P22736 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.99□□□□□ -0.17
NR4A1P22736 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NR4A1P22736 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 AP000845.1-201ENST00000581677 2131 ntBASIC13.99□□□□□ -0.17
NR4A1P22736 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR4A1P22736 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
NR4A1P22736 AC083964.2-201ENST00000623988 2396 ntBASIC13.98□□□□□ -0.17
NR4A1P22736 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NR4A1P22736 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.98□□□□□ -0.17
NR4A1P22736 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.98□□□□□ -0.17
NR4A1P22736 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 MIR770-201ENST00000390219 98 ntBASIC13.98□□□□□ -0.17
NR4A1P22736 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.98□□□□□ -0.17
NR4A1P22736 AC055876.3-201ENST00000431496 288 ntBASIC13.98□□□□□ -0.17
NR4A1P22736 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.98□□□□□ -0.17
NR4A1P22736 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.98□□□□□ -0.17
NR4A1P22736 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.98□□□□□ -0.17
NR4A1P22736 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.98□□□□□ -0.17
NR4A1P22736 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.98□□□□□ -0.17
NR4A1P22736 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.98□□□□□ -0.17
NR4A1P22736 AC138649.4-201ENST00000612222 287 ntBASIC13.98□□□□□ -0.17
NR4A1P22736 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
NR4A1P22736 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR4A1P22736 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.98□□□□□ -0.17
NR4A1P22736 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms