Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX1P22670 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX1P22670 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX1P22670 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RFX1P22670 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RFX1P22670 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFX1P22670 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 TPT1P11-201ENST00000458482 498 ntBASIC16.28■□□□□ 0.2
RFX1P22670 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX1P22670 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX1P22670 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 AP001258.2-201ENST00000529891 490 ntBASIC16.28■□□□□ 0.2
RFX1P22670 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX1P22670 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX1P22670 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RFX1P22670 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX1P22670 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX1P22670 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX1P22670 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX1P22670 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RFX1P22670 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX1P22670 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 OR2I1P-209ENST00000641730 5365 ntBASIC16.27■□□□□ 0.2
RFX1P22670 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX1P22670 AC134312.5-201ENST00000568031 1313 ntBASIC16.27■□□□□ 0.2
RFX1P22670 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX1P22670 RNU1-114P-201ENST00000365297 166 ntBASIC16.27■□□□□ 0.2
RFX1P22670 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.27■□□□□ 0.2
RFX1P22670 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX1P22670 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RFX1P22670 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX1P22670 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX1P22670 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX1P22670 AP001582.1-201ENST00000525856 295 ntBASIC16.27■□□□□ 0.2
RFX1P22670 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.27■□□□□ 0.2
RFX1P22670 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX1P22670 AP000812.2-201ENST00000538934 718 ntBASIC16.27■□□□□ 0.2
RFX1P22670 RHOQP1-201ENST00000555758 579 ntBASIC16.27■□□□□ 0.2
RFX1P22670 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX1P22670 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.27■□□□□ 0.2
RFX1P22670 AP005019.2-201ENST00000615104 511 ntBASIC16.27■□□□□ 0.2
RFX1P22670 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX1P22670 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.27■□□□□ 0.2
RFX1P22670 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFX1P22670 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.27■□□□□ 0.19
RFX1P22670 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
RFX1P22670 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFX1P22670 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.27■□□□□ 0.19
RFX1P22670 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.27■□□□□ 0.19
RFX1P22670 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms