Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.21■□□□□ 0.67
MS4A1P11836 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A1P11836 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 MST1P2-201ENST00000457982 2291 ntBASIC19.21■□□□□ 0.67
MS4A1P11836 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC19.21■□□□□ 0.67
MS4A1P11836 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MS4A1P11836 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
MS4A1P11836 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MS4A1P11836 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A1P11836 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
MS4A1P11836 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 TK2-221ENST00000620035 5060 ntTSL 2 BASIC19.2■□□□□ 0.66
MS4A1P11836 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 AC026434.2-201ENST00000506094 1078 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.2■□□□□ 0.66
MS4A1P11836 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.2■□□□□ 0.66
MS4A1P11836 CLUHP6-201ENST00000580789 941 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 CTBP2P3-201ENST00000585629 1255 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
MS4A1P11836 AC008494.3-201ENST00000606615 944 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 CU634019.7-201ENST00000624153 1185 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 FP236241.2-201ENST00000624906 1185 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MS4A1P11836 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MS4A1P11836 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MS4A1P11836 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MS4A1P11836 AC015656.1-201ENST00000624209 3578 ntBASIC19.2■□□□□ 0.66
MS4A1P11836 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MS4A1P11836 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MS4A1P11836 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A1P11836 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A1P11836 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A1P11836 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 AC236430.1-201ENST00000402231 743 ntBASIC19.19■□□□□ 0.66
MS4A1P11836 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.19■□□□□ 0.66
MS4A1P11836 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.19■□□□□ 0.66
MS4A1P11836 EIF3FP3-201ENST00000434851 1086 ntBASIC19.19■□□□□ 0.66
MS4A1P11836 AC022137.2-201ENST00000503482 481 ntBASIC19.19■□□□□ 0.66
MS4A1P11836 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.19■□□□□ 0.66
MS4A1P11836 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A1P11836 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.19■□□□□ 0.66
MS4A1P11836 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 AL359183.1-201ENST00000623796 2132 ntBASIC19.19■□□□□ 0.66
MS4A1P11836 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC19.19■□□□□ 0.66
MS4A1P11836 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MS4A1P11836 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MS4A1P11836 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
MS4A1P11836 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
MS4A1P11836 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC19.18■□□□□ 0.66
MS4A1P11836 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
MS4A1P11836 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
MS4A1P11836 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.18■□□□□ 0.66
MS4A1P11836 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.18■□□□□ 0.66
MS4A1P11836 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MS4A1P11836 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms