Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LAMC1P11047 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LAMC1P11047 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.59■□□□□ 0.89
LAMC1P11047 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
LAMC1P11047 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LAMC1P11047 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LAMC1P11047 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LAMC1P11047 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.59■□□□□ 0.89
LAMC1P11047 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC20.59■□□□□ 0.89
LAMC1P11047 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.59■□□□□ 0.89
LAMC1P11047 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.59■□□□□ 0.89
LAMC1P11047 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC20.59■□□□□ 0.89
LAMC1P11047 MRPL22P1-201ENST00000505398 616 ntBASIC20.59■□□□□ 0.89
LAMC1P11047 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.59■□□□□ 0.89
LAMC1P11047 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LAMC1P11047 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LAMC1P11047 FAM45BP-202ENST00000592932 1624 ntBASIC20.59■□□□□ 0.89
LAMC1P11047 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LAMC1P11047 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.59■□□□□ 0.89
LAMC1P11047 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.58■□□□□ 0.89
LAMC1P11047 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 MARK2P16-201ENST00000605714 1723 ntBASIC20.58■□□□□ 0.89
LAMC1P11047 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LAMC1P11047 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.58■□□□□ 0.89
LAMC1P11047 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.58■□□□□ 0.89
LAMC1P11047 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 AC025262.2-201ENST00000623975 1056 ntBASIC20.58■□□□□ 0.89
LAMC1P11047 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LAMC1P11047 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.58■□□□□ 0.88
LAMC1P11047 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
LAMC1P11047 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LAMC1P11047 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LAMC1P11047 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LAMC1P11047 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LAMC1P11047 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LAMC1P11047 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 AL627231.1-201ENST00000394467 1125 ntBASIC20.57■□□□□ 0.88
LAMC1P11047 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 AC026410.1-201ENST00000507366 1101 ntBASIC20.57■□□□□ 0.88
LAMC1P11047 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMC1P11047 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LAMC1P11047 AC104506.1-201ENST00000609247 429 ntBASIC20.57■□□□□ 0.88
LAMC1P11047 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 HYMAI-201ENST00000635591 3347 ntBASIC20.57■□□□□ 0.88
LAMC1P11047 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LAMC1P11047 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMC1P11047 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.57■□□□□ 0.88
LAMC1P11047 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMC1P11047 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LAMC1P11047 AL357563.1-201ENST00000404728 395 ntBASIC20.56■□□□□ 0.88
LAMC1P11047 BANF1P3-201ENST00000412556 261 ntBASIC20.56■□□□□ 0.88
LAMC1P11047 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LAMC1P11047 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC20.56■□□□□ 0.88
LAMC1P11047 AC026320.2-201ENST00000434379 478 ntBASIC20.56■□□□□ 0.88
LAMC1P11047 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC20.56■□□□□ 0.88
LAMC1P11047 AC103810.10-201ENST00000606504 343 ntBASIC20.56■□□□□ 0.88
LAMC1P11047 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.56■□□□□ 0.88
LAMC1P11047 AC084781.1-201ENST00000613737 656 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms