Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CYP3A4P08684 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CYP3A4P08684 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.64■□□□□ 0.25
CYP3A4P08684 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CYP3A4P08684 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.64■□□□□ 0.25
CYP3A4P08684 BX284668.4-201ENST00000453917 508 ntBASIC16.64■□□□□ 0.25
CYP3A4P08684 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CYP3A4P08684 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.64■□□□□ 0.25
CYP3A4P08684 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.64■□□□□ 0.25
CYP3A4P08684 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.64■□□□□ 0.25
CYP3A4P08684 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.64■□□□□ 0.25
CYP3A4P08684 SNORD3B-2-202ENST00000571722 791 ntBASIC16.64■□□□□ 0.25
CYP3A4P08684 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CYP3A4P08684 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.64■□□□□ 0.25
CYP3A4P08684 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.64■□□□□ 0.25
CYP3A4P08684 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.64■□□□□ 0.25
CYP3A4P08684 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.64■□□□□ 0.25
CYP3A4P08684 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CYP3A4P08684 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CYP3A4P08684 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CYP3A4P08684 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CYP3A4P08684 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.63■□□□□ 0.25
CYP3A4P08684 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.63■□□□□ 0.25
CYP3A4P08684 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.63■□□□□ 0.25
CYP3A4P08684 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CYP3A4P08684 AC144522.1-201ENST00000625111 1658 ntBASIC16.63■□□□□ 0.25
CYP3A4P08684 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 AC138028.6-201ENST00000616106 1482 ntBASIC16.63■□□□□ 0.25
CYP3A4P08684 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CYP3A4P08684 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CYP3A4P08684 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.63■□□□□ 0.25
CYP3A4P08684 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 AC099548.2-209ENST00000480264 625 ntBASIC16.63■□□□□ 0.25
CYP3A4P08684 AC005740.2-201ENST00000511085 419 ntBASIC16.63■□□□□ 0.25
CYP3A4P08684 SCARNA21-201ENST00000517026 139 ntBASIC16.63■□□□□ 0.25
CYP3A4P08684 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CYP3A4P08684 AC090164.2-201ENST00000611487 516 ntBASIC16.63■□□□□ 0.25
CYP3A4P08684 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CYP3A4P08684 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.63■□□□□ 0.25
CYP3A4P08684 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.63■□□□□ 0.25
CYP3A4P08684 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.63■□□□□ 0.25
CYP3A4P08684 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CYP3A4P08684 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CYP3A4P08684 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CYP3A4P08684 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.62■□□□□ 0.25
CYP3A4P08684 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.62■□□□□ 0.25
CYP3A4P08684 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.62■□□□□ 0.25
CYP3A4P08684 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.62■□□□□ 0.25
CYP3A4P08684 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.62■□□□□ 0.25
CYP3A4P08684 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYP3A4P08684 AC016700.1-201ENST00000429424 312 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.62■□□□□ 0.25
CYP3A4P08684 AKR7A2P1-201ENST00000460134 915 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 AC006122.1-201ENST00000493323 440 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 MARK2P5-201ENST00000507649 634 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 AC022447.6-201ENST00000515522 438 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.62■□□□□ 0.25
CYP3A4P08684 RBM8B-201ENST00000555532 525 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 AC027237.1-201ENST00000560942 655 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 AC013355.1-201ENST00000562625 723 ntBASIC16.62■□□□□ 0.25
CYP3A4P08684 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CYP3A4P08684 MIR6074-201ENST00000612054 107 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms