Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.05■□□□□ 0
RETP07949 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.05■□□□□ 0
RETP07949 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.05■□□□□ 0
RETP07949 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.05■□□□□ 0
RETP07949 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RETP07949 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 AC234644.1-201ENST00000406065 370 ntBASIC15.05■□□□□ -0
RETP07949 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.05■□□□□ -0
RETP07949 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 PDIA3P2-201ENST00000428073 158 ntBASIC15.05■□□□□ -0
RETP07949 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.05■□□□□ -0
RETP07949 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 AC090857.1-201ENST00000527400 390 ntBASIC15.05■□□□□ -0
RETP07949 AP003171.2-201ENST00000528208 925 ntBASIC15.05■□□□□ -0
RETP07949 AC242376.1-201ENST00000559033 726 ntBASIC15.05■□□□□ -0
RETP07949 AC106820.3-201ENST00000561653 397 ntBASIC15.05■□□□□ -0
RETP07949 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.05■□□□□ -0
RETP07949 AC087045.2-201ENST00000606279 1003 ntBASIC15.05■□□□□ -0
RETP07949 AC092171.5-201ENST00000608012 942 ntBASIC15.05■□□□□ -0
RETP07949 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.05■□□□□ -0
RETP07949 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.05■□□□□ -0
RETP07949 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.05■□□□□ -0
RETP07949 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.05■□□□□ -0
RETP07949 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.05■□□□□ -0
RETP07949 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.05■□□□□ -0
RETP07949 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RETP07949 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RETP07949 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.04■□□□□ -0
RETP07949 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.04■□□□□ -0
RETP07949 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
RETP07949 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.04■□□□□ -0
RETP07949 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.04■□□□□ -0
RETP07949 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.04■□□□□ -0
RETP07949 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.04■□□□□ -0
RETP07949 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RETP07949 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.04■□□□□ -0
RETP07949 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.04■□□□□ -0
RETP07949 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RETP07949 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.04■□□□□ -0
RETP07949 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.04■□□□□ -0
RETP07949 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.04■□□□□ -0
RETP07949 AL627389.1-201ENST00000413508 1182 ntBASIC15.04■□□□□ -0
RETP07949 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.04■□□□□ -0
RETP07949 AC078991.1-201ENST00000437297 610 ntBASIC15.04■□□□□ -0
RETP07949 KRT18P66-201ENST00000452970 1269 ntBASIC15.04■□□□□ -0
RETP07949 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.04■□□□□ -0
RETP07949 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.04■□□□□ -0
RETP07949 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RETP07949 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.04■□□□□ -0
RETP07949 AL603764.1-201ENST00000636452 321 ntBASIC15.04■□□□□ -0
RETP07949 NAP1L6-202ENST00000641404 1222 ntBASIC15.04■□□□□ -0
RETP07949 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
RETP07949 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RETP07949 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RETP07949 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RETP07949 AC018892.3-201ENST00000623986 2499 ntBASIC15.04■□□□□ -0
RETP07949 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.04■□□□□ -0
RETP07949 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RETP07949 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RETP07949 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.04■□□□□ -0
RETP07949 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.03■□□□□ -0
RETP07949 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RETP07949 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms