Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.71□□□□□ -0.37
CD3DP04234 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.71□□□□□ -0.37
CD3DP04234 AL592309.1-201ENST00000443127 649 ntBASIC12.71□□□□□ -0.37
CD3DP04234 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.71□□□□□ -0.37
CD3DP04234 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.71□□□□□ -0.37
CD3DP04234 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.71□□□□□ -0.37
CD3DP04234 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.71□□□□□ -0.37
CD3DP04234 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.71□□□□□ -0.37
CD3DP04234 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD3DP04234 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CD3DP04234 RN7SL510P-201ENST00000581311 263 ntBASIC12.71□□□□□ -0.37
CD3DP04234 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.71□□□□□ -0.37
CD3DP04234 RN7SL828P-201ENST00000607615 303 ntBASIC12.71□□□□□ -0.37
CD3DP04234 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.71□□□□□ -0.37
CD3DP04234 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD3DP04234 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD3DP04234 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.71□□□□□ -0.37
CD3DP04234 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.71□□□□□ -0.38
CD3DP04234 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
CD3DP04234 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
CD3DP04234 AC083964.2-201ENST00000623988 2396 ntBASIC12.71□□□□□ -0.38
CD3DP04234 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.71□□□□□ -0.38
CD3DP04234 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CD3DP04234 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
CD3DP04234 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.71□□□□□ -0.38
CD3DP04234 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.71□□□□□ -0.38
CD3DP04234 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD3DP04234 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD3DP04234 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CD3DP04234 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.7□□□□□ -0.38
CD3DP04234 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD3DP04234 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 AC114271.1-201ENST00000612689 2813 ntBASIC12.7□□□□□ -0.38
CD3DP04234 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.7□□□□□ -0.38
CD3DP04234 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.7□□□□□ -0.38
CD3DP04234 FAAHP1-202ENST00000446499 1238 ntBASIC12.7□□□□□ -0.38
CD3DP04234 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.7□□□□□ -0.38
CD3DP04234 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CD3DP04234 ALG1L8P-201ENST00000533887 760 ntBASIC12.7□□□□□ -0.38
CD3DP04234 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD3DP04234 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 AC003101.2-201ENST00000612557 442 ntBASIC12.7□□□□□ -0.38
CD3DP04234 MIR6069-201ENST00000620069 79 ntBASIC12.7□□□□□ -0.38
CD3DP04234 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.7□□□□□ -0.38
CD3DP04234 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CD3DP04234 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CD3DP04234 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CD3DP04234 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.7□□□□□ -0.38
CD3DP04234 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 AC004241.5-201ENST00000623870 2448 ntBASIC12.7□□□□□ -0.38
CD3DP04234 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD3DP04234 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms