Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.58□□□□□ -0.4
CD74P04233 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD74P04233 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD74P04233 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD74P04233 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.58□□□□□ -0.4
CD74P04233 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.57□□□□□ -0.4
CD74P04233 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 HSPA8P5-201ENST00000456928 2069 ntBASIC12.57□□□□□ -0.4
CD74P04233 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 YBX2P1-201ENST00000394192 760 ntBASIC12.57□□□□□ -0.4
CD74P04233 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 KRT18P3-201ENST00000451602 1288 ntBASIC12.57□□□□□ -0.4
CD74P04233 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CD74P04233 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.57□□□□□ -0.4
CD74P04233 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CD74P04233 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.57□□□□□ -0.4
CD74P04233 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CD74P04233 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD74P04233 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.56□□□□□ -0.4
CD74P04233 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD74P04233 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms