Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
APOBP04114 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC8.95□□□□□ -0.98
APOBP04114 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC8.95□□□□□ -0.98
APOBP04114 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 NDUFB10P1-201ENST00000567319 521 ntBASIC8.95□□□□□ -0.98
APOBP04114 MIR4254-201ENST00000581063 76 ntBASIC8.95□□□□□ -0.98
APOBP04114 AL365203.3-201ENST00000609742 2057 ntBASIC8.95□□□□□ -0.98
APOBP04114 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC8.95□□□□□ -0.98
APOBP04114 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 AC090820.1-201ENST00000519722 591 ntBASIC8.95□□□□□ -0.98
APOBP04114 AC091304.3-201ENST00000566500 716 ntBASIC8.95□□□□□ -0.98
APOBP04114 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC8.95□□□□□ -0.98
APOBP04114 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 RPL3P2-204ENST00000413027 1203 ntBASIC8.95□□□□□ -0.98
APOBP04114 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC8.95□□□□□ -0.98
APOBP04114 KRT8P34-201ENST00000577607 1044 ntBASIC8.95□□□□□ -0.98
APOBP04114 AC005865.2-202ENST00000635814 725 ntBASIC8.95□□□□□ -0.98
APOBP04114 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 AL050341.2-201ENST00000567508 1541 ntBASIC8.95□□□□□ -0.98
APOBP04114 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC8.95□□□□□ -0.98
APOBP04114 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 STK24P1-201ENST00000455035 1291 ntBASIC8.95□□□□□ -0.98
APOBP04114 RN7SL128P-201ENST00000467883 305 ntBASIC8.95□□□□□ -0.98
APOBP04114 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC8.95□□□□□ -0.98
APOBP04114 AC078814.4-201ENST00000546650 327 ntBASIC8.95□□□□□ -0.98
APOBP04114 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
APOBP04114 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
APOBP04114 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 AC232323.1-201ENST00000540724 2099 ntBASIC8.94□□□□□ -0.98
APOBP04114 PCDHA1-201ENST00000378133 2726 ntBASIC8.94□□□□□ -0.98
APOBP04114 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC8.94□□□□□ -0.98
APOBP04114 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 RN7SL523P-201ENST00000484401 298 ntBASIC8.94□□□□□ -0.98
APOBP04114 CASP3-205ENST00000517513 964 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 BATF-202ENST00000555504 361 ntTSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 AC254633.1-201ENST00000606790 345 ntBASIC8.94□□□□□ -0.98
APOBP04114 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 AL512324.3-201ENST00000619383 882 ntBASIC8.94□□□□□ -0.98
APOBP04114 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC8.94□□□□□ -0.98
APOBP04114 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 438.5 ms