Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCRP04035 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMGCRP04035 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCRP04035 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGCRP04035 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGCRP04035 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMGCRP04035 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCRP04035 KRT8P31-201ENST00000504812 1408 ntBASIC16.68■□□□□ 0.26
HMGCRP04035 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGCRP04035 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCRP04035 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCRP04035 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGCRP04035 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCRP04035 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCRP04035 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCRP04035 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HMGCRP04035 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HMGCRP04035 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 AC090502.4-201ENST00000551714 1386 ntBASIC16.67■□□□□ 0.26
HMGCRP04035 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 HIST2H2BA-201ENST00000412169 381 ntBASIC16.67■□□□□ 0.26
HMGCRP04035 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCRP04035 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCRP04035 ALG1L6P-201ENST00000515248 758 ntBASIC16.67■□□□□ 0.26
HMGCRP04035 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGCRP04035 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCRP04035 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGCRP04035 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.67■□□□□ 0.26
HMGCRP04035 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCRP04035 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.67■□□□□ 0.26
HMGCRP04035 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCRP04035 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCRP04035 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCRP04035 AC009090.5-201ENST00000624886 2285 ntBASIC16.67■□□□□ 0.26
HMGCRP04035 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCRP04035 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMGCRP04035 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCRP04035 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCRP04035 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCRP04035 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HMGCRP04035 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HMGCRP04035 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCRP04035 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCRP04035 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HMGCRP04035 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCRP04035 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 FTH1P22-201ENST00000456305 520 ntBASIC16.66■□□□□ 0.26
HMGCRP04035 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 C2orf69P1-201ENST00000563532 1093 ntBASIC16.66■□□□□ 0.26
HMGCRP04035 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
HMGCRP04035 AC084781.1-201ENST00000613737 656 ntBASIC16.66■□□□□ 0.26
HMGCRP04035 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HMGCRP04035 AC009560.1-201ENST00000620208 434 ntBASIC16.66■□□□□ 0.26
HMGCRP04035 AC018629.1-201ENST00000623381 1736 ntBASIC16.66■□□□□ 0.26
HMGCRP04035 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGCRP04035 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCRP04035 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCRP04035 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms