Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHRNA1P02708 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRNA1P02708 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 PPT1-215ENST00000641471 2368 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHRNA1P02708 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHRNA1P02708 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 RN7SL181P-201ENST00000462921 277 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRNA1P02708 AC003686.1-201ENST00000550956 1034 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.07■□□□□ 0.16
CHRNA1P02708 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRNA1P02708 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRNA1P02708 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRNA1P02708 AC138894.2-201ENST00000602838 371 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 AC087045.2-201ENST00000606279 1003 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 AC092171.5-201ENST00000608012 942 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 LINC01783-202ENST00000614408 828 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 BX284668.2-205ENST00000619677 828 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRNA1P02708 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRNA1P02708 KRT8P28-201ENST00000433288 1390 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 AL136172.1-201ENST00000598590 1394 ntBASIC16.07■□□□□ 0.16
CHRNA1P02708 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CHRNA1P02708 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CHRNA1P02708 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHRNA1P02708 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRNA1P02708 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRNA1P02708 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRNA1P02708 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 MIR3188-201ENST00000583494 85 ntBASIC16.06■□□□□ 0.16
CHRNA1P02708 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 COX6A1P2-201ENST00000620597 330 ntBASIC16.06■□□□□ 0.16
CHRNA1P02708 AC011491.1-203ENST00000637688 543 ntBASIC16.06■□□□□ 0.16
CHRNA1P02708 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHRNA1P02708 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRNA1P02708 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRNA1P02708 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRNA1P02708 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CHRNA1P02708 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRNA1P02708 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CHRNA1P02708 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 FER1L4-210ENST00000615531 5998 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRNA1P02708 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.05■□□□□ 0.16
CHRNA1P02708 AC078991.1-201ENST00000437297 610 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 NPM1P43-201ENST00000558669 786 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
CHRNA1P02708 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CHRNA1P02708 MIR6842-201ENST00000612539 65 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.05■□□□□ 0.16
CHRNA1P02708 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms