Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HLA-DRAP01903 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DRAP01903 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 FAM45BP-202ENST00000592932 1624 ntBASIC16.02■□□□□ 0.16
HLA-DRAP01903 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 AC022447.6-201ENST00000515522 438 ntBASIC16.02■□□□□ 0.16
HLA-DRAP01903 IGHV3-71-201ENST00000523324 359 ntBASIC16.02■□□□□ 0.16
HLA-DRAP01903 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DRAP01903 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 AC008687.7-202ENST00000637404 953 ntBASIC16.02■□□□□ 0.16
HLA-DRAP01903 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DRAP01903 AC002472.3-201ENST00000640124 621 ntBASIC16.02■□□□□ 0.16
HLA-DRAP01903 AC097359.2-201ENST00000604992 2389 ntBASIC16.02■□□□□ 0.15
HLA-DRAP01903 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 KRT8P4-201ENST00000509735 1454 ntBASIC16.02■□□□□ 0.15
HLA-DRAP01903 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HLA-DRAP01903 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.02■□□□□ 0.15
HLA-DRAP01903 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
HLA-DRAP01903 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HLA-DRAP01903 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 AC005912.2-201ENST00000619492 2400 ntBASIC16.02■□□□□ 0.15
HLA-DRAP01903 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DRAP01903 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
HLA-DRAP01903 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AC099336.1-201ENST00000417053 1171 ntBASIC16.01■□□□□ 0.15
HLA-DRAP01903 CNN2P10-201ENST00000443067 918 ntBASIC16.01■□□□□ 0.15
HLA-DRAP01903 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AC079316.1-201ENST00000548397 411 ntBASIC16.01■□□□□ 0.15
HLA-DRAP01903 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 PPY2P-201ENST00000582808 702 ntBASIC16.01■□□□□ 0.15
HLA-DRAP01903 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 MIR4259-201ENST00000584466 101 ntBASIC16.01■□□□□ 0.15
HLA-DRAP01903 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 BX088702.1-201ENST00000610784 235 ntBASIC16.01■□□□□ 0.15
HLA-DRAP01903 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
HLA-DRAP01903 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DRAP01903 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HLA-DRAP01903 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DRAP01903 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms