Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.19■□□□□ 0.66
LTN1O94822 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 AC019109.1-201ENST00000401725 1874 ntBASIC19.19■□□□□ 0.66
LTN1O94822 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.19■□□□□ 0.66
LTN1O94822 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 MIR1227-201ENST00000408484 88 ntBASIC19.19■□□□□ 0.66
LTN1O94822 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.19■□□□□ 0.66
LTN1O94822 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 AC005586.2-201ENST00000563946 837 ntBASIC19.19■□□□□ 0.66
LTN1O94822 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.19■□□□□ 0.66
LTN1O94822 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTN1O94822 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LTN1O94822 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 EEF1DP2-201ENST00000433698 843 ntBASIC19.18■□□□□ 0.66
LTN1O94822 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.18■□□□□ 0.66
LTN1O94822 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.18■□□□□ 0.66
LTN1O94822 NDUFB10P1-201ENST00000567319 521 ntBASIC19.18■□□□□ 0.66
LTN1O94822 RN7SL357P-201ENST00000581065 298 ntBASIC19.18■□□□□ 0.66
LTN1O94822 AL118522.1-201ENST00000611368 560 ntBASIC19.18■□□□□ 0.66
LTN1O94822 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.18■□□□□ 0.66
LTN1O94822 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LTN1O94822 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.18■□□□□ 0.66
LTN1O94822 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTN1O94822 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.18■□□□□ 0.66
LTN1O94822 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.17■□□□□ 0.66
LTN1O94822 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.17■□□□□ 0.66
LTN1O94822 AC005740.1-201ENST00000515639 522 ntBASIC19.17■□□□□ 0.66
LTN1O94822 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LTN1O94822 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 AC006158.1-201ENST00000610661 249 ntBASIC19.17■□□□□ 0.66
LTN1O94822 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.17■□□□□ 0.66
LTN1O94822 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 AC105917.1-201ENST00000506637 2539 ntBASIC19.17■□□□□ 0.66
LTN1O94822 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.17■□□□□ 0.66
LTN1O94822 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LTN1O94822 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.17■□□□□ 0.66
LTN1O94822 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.17■□□□□ 0.66
LTN1O94822 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.17■□□□□ 0.66
LTN1O94822 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.17■□□□□ 0.66
LTN1O94822 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTN1O94822 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.16■□□□□ 0.66
LTN1O94822 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.16■□□□□ 0.66
LTN1O94822 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 KRT8P43-201ENST00000406052 1458 ntBASIC19.16■□□□□ 0.66
LTN1O94822 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.16■□□□□ 0.66
LTN1O94822 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTN1O94822 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms