Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTNND1O60716 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CTNND1O60716 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CTNND1O60716 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 FAM90A2P-201ENST00000511144 1395 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 FAM90A25P-201ENST00000528404 1395 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CTNND1O60716 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 AL627231.1-201ENST00000394467 1125 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.33■□□□□ 0.36
CTNND1O60716 AC098935.1-201ENST00000446057 611 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.33■□□□□ 0.36
CTNND1O60716 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 RN7SL555P-201ENST00000584742 339 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 AC133540.1-201ENST00000620845 1019 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CTNND1O60716 AC051619.9-201ENST00000623237 597 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTNND1O60716 NFIC-211ENST00000641145 8399 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTNND1O60716 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTNND1O60716 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.33■□□□□ 0.36
CTNND1O60716 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 AC144831.1-201ENST00000573312 2656 ntBASIC17.33■□□□□ 0.36
CTNND1O60716 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.33■□□□□ 0.36
CTNND1O60716 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTNND1O60716 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNND1O60716 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.32■□□□□ 0.36
CTNND1O60716 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.32■□□□□ 0.36
CTNND1O60716 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 AC104784.1-201ENST00000473096 294 ntBASIC17.32■□□□□ 0.36
CTNND1O60716 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNND1O60716 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNND1O60716 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.32■□□□□ 0.36
CTNND1O60716 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTNND1O60716 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.32■□□□□ 0.36
CTNND1O60716 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTNND1O60716 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTNND1O60716 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
CTNND1O60716 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
CTNND1O60716 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CTNND1O60716 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.31■□□□□ 0.36
CTNND1O60716 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTNND1O60716 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms