Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCH2Q9Y6C5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCH2Q9Y6C5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PTCH2Q9Y6C5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PTCH2Q9Y6C5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCH2Q9Y6C5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCH2Q9Y6C5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCH2Q9Y6C5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 MIR566-201ENST00000385187 94 ntBASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 SERBP1P2-201ENST00000436888 1164 ntBASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 MIR5001-201ENST00000580185 100 ntBASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 CTBP2P8-201ENST00000422584 1330 ntBASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCH2Q9Y6C5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 AC007292.2-201ENST00000593524 1812 ntBASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 SALL4P5-201ENST00000419001 1760 ntBASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 AL672207.1-201ENST00000328462 1570 ntBASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 GCOM2-201ENST00000509133 1104 ntBASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCH2Q9Y6C5 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms