Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 BAX-205ENST00000391871 687 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC21.79■■□□□ 1.08
CDC42BPBQ9Y5S2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 AC006987.1-201ENST00000413610 527 ntBASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 AC005586.2-201ENST00000563946 837 ntBASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 PEBP1P2-201ENST00000603980 558 ntBASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 AGAP7P-201ENST00000582299 2062 ntBASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 AGAP14-201ENST00000624701 2060 ntBASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDC42BPBQ9Y5S2 GEMIN8P4-201ENST00000380526 729 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 ALG1L3P-201ENST00000503331 765 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 SNORD3B-1-201ENST00000577988 758 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 RN7SL455P-201ENST00000580629 282 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 AC104506.1-201ENST00000609247 429 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 HPX-213ENST00000615166 826 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 MIR6746-201ENST00000620971 63 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 AL354702.1-201ENST00000442006 1960 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 FAM86B3P-203ENST00000523992 854 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 AC010632.2-201ENST00000588369 1224 ntBASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC42BPBQ9Y5S2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
CDC42BPBQ9Y5S2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.77■■□□□ 1.07
CDC42BPBQ9Y5S2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDC42BPBQ9Y5S2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDC42BPBQ9Y5S2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDC42BPBQ9Y5S2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 494.5 ms