Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 AC023090.2-201ENST00000625182 2110 ntBASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 INTS4P1-203ENST00000641008 3683 ntBASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA11Q9Y5H2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 MTHFR-210ENST00000641407 2387 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 MIR661-201ENST00000384842 89 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AC236430.1-201ENST00000402231 743 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AL162726.2-201ENST00000438986 1017 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ELK1P1-201ENST00000485699 580 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ADAM3B-201ENST00000569937 840 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AC140912.1-201ENST00000577171 1054 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AC097359.2-201ENST00000604992 2389 ntBASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PCDHGA11Q9Y5H2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 RNU1-114P-201ENST00000365297 166 ntBASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 KLF2P2-201ENST00000416807 1039 ntBASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AP001063.1-201ENST00000568332 529 ntBASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 MIR4745-201ENST00000577608 62 ntBASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA11Q9Y5H2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms