Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 AL080243.2-201ENST00000418783 582 ntBASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC17.25■□□□□ 0.35
R3HCC1Q9Y3T6 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
R3HCC1Q9Y3T6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 AL390955.2-201ENST00000603032 514 ntBASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms