Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NPIPA1Q9UND3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA1Q9UND3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
NPIPA1Q9UND3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA1Q9UND3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NPIPA1Q9UND3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.83□□□□□ -0.19
NPIPA1Q9UND3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 AL158070.2-201ENST00000623713 1621 ntBASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 AC068418.2-201ENST00000577309 3703 ntBASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MTX1P1-201ENST00000440904 838 ntBASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 KRT8P13-201ENST00000463294 1010 ntBASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 LINC02228-204ENST00000642115 2962 ntBASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NPIPA1Q9UND3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 ZNF767P-206ENST00000513792 565 ntBASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA1Q9UND3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms