Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRIT1Q9P2V4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.4□□□□□ -0.11
LRIT1Q9P2V4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 AC244394.1-201ENST00000435000 1665 ntBASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 PUDPP3-201ENST00000445368 636 ntBASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 AL008718.2-201ENST00000609206 1313 ntBASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.39□□□□□ -0.11
LRIT1Q9P2V4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC008132.1-202ENST00000342005 1389 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 RN7SL720P-201ENST00000488178 304 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 IMP3P2-201ENST00000489760 475 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC125604.1-201ENST00000496255 707 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC008805.1-201ENST00000590892 364 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC009884.2-201ENST00000603110 324 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 BX088702.1-201ENST00000610784 235 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC015967.2-201ENST00000624092 234 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AC006435.4-201ENST00000625037 234 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AL356737.1-201ENST00000634391 234 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 AL157791.1-201ENST00000553667 1699 ntBASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRIT1Q9P2V4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms