Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AL138725.1-201ENST00000407347 1314 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 BX842568.4-201ENST00000421222 227 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 GIMAP3P-201ENST00000495150 836 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 GCOM2-201ENST00000509133 1104 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AC009407.1-201ENST00000568958 598 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MKS1Q9NXB0 AC015688.4-201ENST00000580780 1647 ntBASIC14.74□□□□□ -0.05
MKS1Q9NXB0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RNU1-114P-201ENST00000365297 166 ntBASIC14.73□□□□□ -0.05
MKS1Q9NXB0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 EIF3FP3-201ENST00000434851 1086 ntBASIC14.73□□□□□ -0.05
MKS1Q9NXB0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RN7SL399P-201ENST00000471648 279 ntBASIC14.73□□□□□ -0.05
MKS1Q9NXB0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 AC103988.2-201ENST00000561804 725 ntBASIC14.73□□□□□ -0.05
MKS1Q9NXB0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 AP001002.3-201ENST00000623482 206 ntBASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MKS1Q9NXB0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MKS1Q9NXB0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms