Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AL035414.1-201ENST00000451327 857 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 CCNL2P1-201ENST00000512846 969 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 GRAMD4P6-201ENST00000556999 244 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC067931.2-201ENST00000623655 2003 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MIR648-201ENST00000385046 94 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 BX088702.1-201ENST00000610784 235 ntBASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHD8Q9HCK8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 SIRPB3P-201ENST00000340424 1216 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 U73169.1-201ENST00000395152 367 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 ASS1P2-201ENST00000439895 1223 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC099328.1-201ENST00000498809 1030 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 ZBED1P1-201ENST00000502364 1930 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC006504.5-208ENST00000588784 2401 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC007952.5-201ENST00000572818 1486 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AL157823.1-201ENST00000403727 628 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC087203.1-201ENST00000532111 1181 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 DBET-201ENST00000630918 3363 ntBASIC13.48□□□□□ -0.25
CHD8Q9HCK8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms