Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.71■□□□□ 0.27
CBX8Q9HC52 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX8Q9HC52 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CBX8Q9HC52 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CBX8Q9HC52 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX8Q9HC52 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX8Q9HC52 AL356585.2-201ENST00000625078 2396 ntBASIC16.71■□□□□ 0.26
CBX8Q9HC52 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CBX8Q9HC52 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AC011840.2-201ENST00000563063 1520 ntBASIC16.7■□□□□ 0.26
CBX8Q9HC52 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AL158212.4-201ENST00000624062 1286 ntBASIC16.7■□□□□ 0.26
CBX8Q9HC52 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.7■□□□□ 0.26
CBX8Q9HC52 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX8Q9HC52 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 HSPA8P5-201ENST00000456928 2069 ntBASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC073548.1-201ENST00000624088 1882 ntBASIC16.69■□□□□ 0.26
CBX8Q9HC52 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC020658.7-201ENST00000624274 2442 ntBASIC16.69■□□□□ 0.26
CBX8Q9HC52 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 NUTM2HP-201ENST00000442076 2498 ntBASIC16.69■□□□□ 0.26
CBX8Q9HC52 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CBX8Q9HC52 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AL512356.2-201ENST00000546955 174 ntBASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.69■□□□□ 0.26
CBX8Q9HC52 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms