Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPF3BQ9BZI7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 COX5BP8-201ENST00000416911 349 ntBASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 ARSEP1-201ENST00000420443 635 ntBASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AC022447.6-201ENST00000515522 438 ntBASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AC004466.1-201ENST00000599515 1080 ntBASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AC008494.3-201ENST00000606615 944 ntBASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 AC004233.3-201ENST00000607794 1269 ntBASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPF3BQ9BZI7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 GPR53P-205ENST00000457298 1084 ntBASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC022616.1-201ENST00000518688 554 ntBASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 TMEM261P1-201ENST00000604899 340 ntBASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 CU639417.3-201ENST00000624240 1404 ntBASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPF3BQ9BZI7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms