Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AC148477.4-201ENST00000613430 1793 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AC012441.1-201ENST00000446669 685 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AC022210.1-201ENST00000449856 793 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 KLF2P4-201ENST00000451959 1225 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 CTBP2P5-201ENST00000454986 1264 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AL645728.2-202ENST00000641679 227 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AC087386.2-201ENST00000623212 4637 ntBASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PCGF1Q9BSM1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 PDIA3P1-201ENST00000471856 1510 ntBASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 AC007274.1-201ENST00000439805 662 ntBASIC12.63□□□□□ -0.39
PCGF1Q9BSM1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms