Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AC025678.2-201ENST00000562061 970 ntBASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AC093028.1-201ENST00000622998 982 ntBASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 AL138799.1-201ENST00000448213 1675 ntBASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HDHD3Q9BSH5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 MBLAC2-202ENST00000514906 1936 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 KRT18P13-201ENST00000400056 1290 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 TSSK5P-201ENST00000423978 907 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 IGHV3-42-201ENST00000520410 361 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AC009407.1-201ENST00000568958 598 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 AL158211.3-201ENST00000607385 239 ntBASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HDHD3Q9BSH5 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms