Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EBF4Q9BQW3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 AC004461.2-201ENST00000629517 803 ntBASIC14.59□□□□□ -0.07
EBF4Q9BQW3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
EBF4Q9BQW3 AC020658.7-201ENST00000624274 2442 ntBASIC14.58□□□□□ -0.07
EBF4Q9BQW3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
EBF4Q9BQW3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 MYADML-201ENST00000474610 2147 ntBASIC14.58□□□□□ -0.08
EBF4Q9BQW3 POLD2P1-201ENST00000511220 997 ntBASIC14.58□□□□□ -0.08
EBF4Q9BQW3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.58□□□□□ -0.08
EBF4Q9BQW3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms