Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 RN7SKP230-201ENST00000365642 335 ntBASIC17.35■□□□□ 0.37
SLF1Q9BQI6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 EIF4HP1-201ENST00000453115 687 ntBASIC17.35■□□□□ 0.37
SLF1Q9BQI6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 AL021578.1-201ENST00000613646 709 ntBASIC17.35■□□□□ 0.37
SLF1Q9BQI6 AL023803.2-201ENST00000620080 638 ntBASIC17.35■□□□□ 0.37
SLF1Q9BQI6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 AC023024.2-201ENST00000623561 1993 ntBASIC17.35■□□□□ 0.37
SLF1Q9BQI6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLF1Q9BQI6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 FLJ16779-201ENST00000612722 7638 ntBASIC17.34■□□□□ 0.37
SLF1Q9BQI6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 FAM45BP-202ENST00000592932 1624 ntBASIC17.34■□□□□ 0.37
SLF1Q9BQI6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 AC022748.3-201ENST00000621828 275 ntBASIC17.34■□□□□ 0.37
SLF1Q9BQI6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SLF1Q9BQI6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 AC126365.1-201ENST00000578585 1514 ntBASIC17.33■□□□□ 0.37
SLF1Q9BQI6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLF1Q9BQI6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AC068587.6-202ENST00000641839 5619 ntBASIC17.33■□□□□ 0.36
SLF1Q9BQI6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AL138725.1-201ENST00000407347 1314 ntBASIC17.33■□□□□ 0.36
SLF1Q9BQI6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.33■□□□□ 0.36
SLF1Q9BQI6 AL162426.1-201ENST00000624141 743 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms