Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AC100827.2-201ENST00000563214 1194 ntBASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AC009955.4-201ENST00000597192 544 ntBASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDK5RAP1Q96SZ6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AC126755.1-201ENST00000525846 6405 ntBASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AC007292.2-201ENST00000593524 1812 ntBASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AC092135.3-201ENST00000624151 1846 ntBASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AC091804.1-201ENST00000486888 567 ntBASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 AC132192.2-201ENST00000596206 1147 ntBASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDK5RAP1Q96SZ6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDK5RAP1Q96SZ6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 MYO15B-237ENST00000642007 4893 ntBASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 MIR1247-201ENST00000408206 136 ntBASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AC012441.2-201ENST00000444843 739 ntBASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AC027601.3-201ENST00000622907 509 ntBASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 AL162426.1-201ENST00000624141 743 ntBASIC15.45■□□□□ 0.06
CDK5RAP1Q96SZ6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms