Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 FGFR3P6-201ENST00000457012 610 ntBASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 AL365181.3-201ENST00000605886 3222 ntBASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 AC004790.2-201ENST00000623588 572 ntBASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IPQ96QF0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IPQ96QF0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms