Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.41□□□□□ -0.42
CSMD1Q96PZ7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 BPIFB5P-201ENST00000457066 1099 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC106881.1-201ENST00000605849 3329 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC006058.4-201ENST00000624016 1670 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC069224.1-201ENST00000566372 1715 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AL513523.2-202ENST00000427283 2040 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC108734.2-201ENST00000420887 1069 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 BCRP4-201ENST00000506079 804 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 RNA5SP359-201ENST00000364838 113 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC098657.1-201ENST00000416270 1135 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 EEF1DP7-201ENST00000580496 513 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 AC002044.2-201ENST00000624910 970 ntBASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CSMD1Q96PZ7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.4□□□□□ -0.43
CSMD1Q96PZ7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 INO80E-209ENST00000567254 625 ntTSL 2 BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AC008972.2-201ENST00000606587 494 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 AC020904.3-201ENST00000624199 442 ntBASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CSMD1Q96PZ7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms