Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 LINC01101-201ENST00000622953 1884 ntBASIC15.4■□□□□ 0.06
RPRD1AQ96P16 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AL136309.1-201ENST00000403917 691 ntBASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AC004945.1-201ENST00000416738 983 ntBASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AL355994.2-201ENST00000447882 704 ntBASIC15.4■□□□□ 0.06
RPRD1AQ96P16 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 MIR4683-201ENST00000579659 81 ntBASIC15.4■□□□□ 0.06
RPRD1AQ96P16 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
RPRD1AQ96P16 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 RPL13AP20-201ENST00000459725 609 ntBASIC15.39■□□□□ 0.05
RPRD1AQ96P16 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 EEF1DP1-201ENST00000585891 896 ntBASIC15.39■□□□□ 0.05
RPRD1AQ96P16 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 AC002472.3-201ENST00000640124 621 ntBASIC15.39■□□□□ 0.05
RPRD1AQ96P16 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 TUBB1P2-201ENST00000422712 1306 ntBASIC15.39■□□□□ 0.05
RPRD1AQ96P16 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 TUBB1P1-201ENST00000503144 1300 ntBASIC15.39■□□□□ 0.05
RPRD1AQ96P16 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.39■□□□□ 0.05
RPRD1AQ96P16 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 TNRC18P2-201ENST00000417666 2714 ntBASIC15.38■□□□□ 0.05
RPRD1AQ96P16 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.38■□□□□ 0.05
RPRD1AQ96P16 REXO1L6P-201ENST00000603433 1515 ntBASIC15.38■□□□□ 0.05
RPRD1AQ96P16 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms