Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 RN7SL219P-201ENST00000582872 296 ntBASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 AC018735.1-201ENST00000437208 1502 ntBASIC14.87□□□□□ -0.03
ECHDC3Q96DC8 CICP24-201ENST00000605464 2705 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AL354702.1-201ENST00000442006 1960 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AL035414.1-201ENST00000451327 857 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AC005730.2-201ENST00000564549 1184 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AC027601.3-201ENST00000622907 509 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AL008638.5-201ENST00000623814 1298 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 AC139712.1-201ENST00000378256 1875 ntBASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ECHDC3Q96DC8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.85□□□□□ -0.03
ECHDC3Q96DC8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms