Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HPS1Q92902 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
HPS1Q92902 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.86□□□□□ -0.19
HPS1Q92902 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.86□□□□□ -0.19
HPS1Q92902 ELOCP6-201ENST00000429066 328 ntBASIC13.86□□□□□ -0.19
HPS1Q92902 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 FAM207CP-201ENST00000443486 507 ntBASIC13.86□□□□□ -0.19
HPS1Q92902 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ELOCP12-201ENST00000458706 328 ntBASIC13.86□□□□□ -0.19
HPS1Q92902 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.86□□□□□ -0.19
HPS1Q92902 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.86□□□□□ -0.19
HPS1Q92902 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC13.86□□□□□ -0.19
HPS1Q92902 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.86□□□□□ -0.19
HPS1Q92902 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 AC022960.2-201ENST00000616300 666 ntBASIC13.86□□□□□ -0.19
HPS1Q92902 MIR6080-201ENST00000617359 66 ntBASIC13.86□□□□□ -0.19
HPS1Q92902 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.86□□□□□ -0.19
HPS1Q92902 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.86□□□□□ -0.19
HPS1Q92902 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.86□□□□□ -0.19
HPS1Q92902 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
HPS1Q92902 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
HPS1Q92902 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HPS1Q92902 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HPS1Q92902 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HPS1Q92902 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.85□□□□□ -0.19
HPS1Q92902 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 AC104629.1-201ENST00000494226 508 ntBASIC13.85□□□□□ -0.19
HPS1Q92902 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
HPS1Q92902 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.85□□□□□ -0.19
HPS1Q92902 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.85□□□□□ -0.19
HPS1Q92902 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms