Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 AC026740.1-201ENST00000607068 791 ntBASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 CICP14-201ENST00000629111 2732 ntBASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NEDD1Q8NHV4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 CYP4F23P-201ENST00000593402 1579 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 CYP46A4P-201ENST00000414953 267 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 SPTLC1P5-201ENST00000450718 252 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 AC006122.1-201ENST00000493323 440 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 AC125604.1-201ENST00000496255 707 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 AC009779.1-201ENST00000551138 283 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 RN7SL774P-201ENST00000577467 290 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 AL354702.1-201ENST00000442006 1960 ntBASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NEDD1Q8NHV4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 RBM8B-201ENST00000555532 525 ntBASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 AC100757.4-201ENST00000626934 759 ntBASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD1Q8NHV4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms