Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 AC098614.1-201ENST00000368528 745 ntBASIC14.01□□□□□ -0.17
NUP43Q8NFH3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 TLE1P1-201ENST00000422965 589 ntBASIC14.01□□□□□ -0.17
NUP43Q8NFH3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 TPT1P11-201ENST00000458482 498 ntBASIC14.01□□□□□ -0.17
NUP43Q8NFH3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 AC145423.3-201ENST00000615987 467 ntBASIC14.01□□□□□ -0.17
NUP43Q8NFH3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AC003102.2-201ENST00000589195 1469 ntBASIC14□□□□□ -0.17
NUP43Q8NFH3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14□□□□□ -0.17
NUP43Q8NFH3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 RN7SL752P-201ENST00000463779 287 ntBASIC14□□□□□ -0.17
NUP43Q8NFH3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AC022447.6-201ENST00000515522 438 ntBASIC14□□□□□ -0.17
NUP43Q8NFH3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AC068587.3-201ENST00000526613 355 ntBASIC14□□□□□ -0.17
NUP43Q8NFH3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14□□□□□ -0.17
NUP43Q8NFH3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14□□□□□ -0.17
NUP43Q8NFH3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 MIR5189-201ENST00000577370 114 ntBASIC14□□□□□ -0.17
NUP43Q8NFH3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14□□□□□ -0.17
NUP43Q8NFH3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NUP43Q8NFH3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14□□□□□ -0.17
NUP43Q8NFH3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms