Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 AC232323.1-201ENST00000540724 2099 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 AC098850.1-201ENST00000419919 790 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 NUS1P3-201ENST00000423502 862 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 BCRP1-201ENST00000444246 691 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 AC092552.1-201ENST00000547243 906 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 AC123567.1-201ENST00000548294 1261 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 SPCS2P1-201ENST00000561636 679 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 AL132655.2-201ENST00000596276 594 ntBASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF439Q8NDP4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ZNF439Q8NDP4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 KRT8P22-201ENST00000562317 1415 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 C1QBPP1-201ENST00000400117 770 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 SPDYE22P-201ENST00000582158 798 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TMEM261P1-201ENST00000604899 340 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AL096865.1-201ENST00000606796 927 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 BX539320.1-201ENST00000623759 877 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AC018442.1-201ENST00000421439 2061 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 LINC00552-201ENST00000625151 2579 ntBASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms