Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 THY1-209ENST00000580275 578 ntTSL 3 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 AP000322.3-201ENST00000608665 388 ntBASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 AL451007.2-201ENST00000632004 563 ntBASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CFAP43Q8NDM7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 PEBP1P2-201ENST00000603980 558 ntBASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 MME-218ENST00000625667 363 ntTSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CFAP43Q8NDM7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A21P-201ENST00000510875 1396 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A15P-201ENST00000514465 1395 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A6P-201ENST00000515148 1394 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A16P-201ENST00000526662 1395 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A9P-201ENST00000527940 1395 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A5P-201ENST00000528738 1395 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A14P-201ENST00000530386 1395 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 FAM90A13P-201ENST00000534703 1395 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 AC015688.4-201ENST00000580780 1647 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 AL135901.1-201ENST00000451812 333 ntBASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 POR-201ENST00000394893 2532 ntTSL 5 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
CFAP43Q8NDM7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 AQP7P5-201ENST00000428759 1049 ntBASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 AQP7P4-201ENST00000447083 1042 ntBASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 AQP7P2-201ENST00000453967 1041 ntBASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 AC106047.2-201ENST00000511723 743 ntBASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 AQP7P3-201ENST00000624547 1041 ntBASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms