Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 AC010491.1-201ENST00000563101 2797 ntBASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 AC108724.1-201ENST00000481669 352 ntBASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 AL160191.2-201ENST00000603975 601 ntBASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCDC168Q8NDH2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.33□□□□□ -0.43
CCDC168Q8NDH2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCDC168Q8NDH2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCDC168Q8NDH2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.33□□□□□ -0.43
CCDC168Q8NDH2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 LINC00554-201ENST00000564841 3011 ntBASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 KRT8P30-201ENST00000432100 650 ntBASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 AC124067.4-201ENST00000519691 2379 ntBASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 XBP1P1-201ENST00000436573 652 ntBASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 AC138701.2-201ENST00000553634 226 ntBASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCDC168Q8NDH2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CCDC168Q8NDH2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms