Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ALG3P1-201ENST00000508806 1114 ntBASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 IGLV3-15-201ENST00000518356 244 ntBASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 MIR4750-201ENST00000584564 56 ntBASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AC073352.2-201ENST00000609385 439 ntBASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AP003419.4-201ENST00000616071 517 ntBASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 AL138725.1-201ENST00000407347 1314 ntBASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SYNPOQ8N3V7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC011840.2-201ENST00000563063 1520 ntBASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 FAM90A7P-201ENST00000382628 1395 ntBASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 FAM90A23P-201ENST00000400136 1395 ntBASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC087481.3-201ENST00000602886 1894 ntBASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 RN7SL555P-201ENST00000584742 339 ntBASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC051619.9-201ENST00000623237 597 ntBASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AL137783.1-201ENST00000623494 1896 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms