Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 KRT8P14-201ENST00000414254 1442 ntBASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00346Q8IVM7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 AC055811.4-201ENST00000624039 1754 ntBASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 AC027601.5-201ENST00000624065 2482 ntBASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 MYCLP2-201ENST00000449268 967 ntBASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 AJ011932.1-201ENST00000621707 465 ntBASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 PRSS30P-206ENST00000641773 873 ntBASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00346Q8IVM7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00346Q8IVM7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 MIR661-201ENST00000384842 89 ntBASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 KLF2P2-201ENST00000416807 1039 ntBASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC00346Q8IVM7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms