Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 INE2-201ENST00000630399 1874 ntBASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUDCD3Q8IVD9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 DMBT1P1-203ENST00000636837 4628 ntBASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 KRT18P58-201ENST00000527480 1120 ntBASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AL512361.1-201ENST00000554200 418 ntBASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AC004835.2-201ENST00000603762 682 ntBASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AL109936.8-201ENST00000641772 604 ntBASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NUDCD3Q8IVD9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 KRT8P24-201ENST00000560290 1559 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 RN7SL618P-201ENST00000477850 296 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 POLD2P1-201ENST00000511220 997 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 AP000344.2-201ENST00000512987 629 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 SDHAP3-202ENST00000515467 728 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms