Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 REXO1L1P-201ENST00000379010 6598 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 AL645937.2-201ENST00000396808 931 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 AC104596.2-201ENST00000512793 793 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 AC104794.3-201ENST00000566840 1248 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 CSPG4P11-201ENST00000560634 4910 ntBASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HDDC2Q7Z4H3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 NUS1P3-201ENST00000423502 862 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 FAM86LP-201ENST00000478302 853 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 INGX-202ENST00000489074 768 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AC055876.2-201ENST00000531834 546 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AC099568.2-201ENST00000609194 695 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AL391069.4-201ENST00000609583 481 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 AC004840.1-201ENST00000636359 365 ntBASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HDDC2Q7Z4H3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms