Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 RN7SL665P-201ENST00000578793 300 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 RNF165-205ENST00000588679 2904 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 AC025183.3-201ENST00000623526 1482 ntBASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT28Q7Z3Y7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 TEKT4P2-202ENST00000559466 1312 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC139712.1-201ENST00000378256 1875 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 RN7SL494P-201ENST00000461517 304 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC093826.1-201ENST00000508655 993 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 WASH3P-207ENST00000560956 1394 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 AC092135.3-201ENST00000624151 1846 ntBASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KRT28Q7Z3Y7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 C18orf15-201ENST00000623680 2534 ntBASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 SIGLEC22P-201ENST00000599104 714 ntBASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT28Q7Z3Y7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
KRT28Q7Z3Y7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.77■□□□□ 0.75
KRT28Q7Z3Y7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT28Q7Z3Y7 CTBP2P8-201ENST00000422584 1330 ntBASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 BRD7P5-201ENST00000299197 1822 ntBASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT28Q7Z3Y7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms